Theory.
Every tyre has an individual and unique barcode.
Yes, no team or rider can request a specific tyre, I mean, let us not forget that each team/rider gets the same number and type of tyres allocated as does each and every rider.
Now, given that all tyres are manufactured equally, it goes without saying that no rider 'needs' to request a specific tyre as they are firstly all made equal and secondly, all riders get the same number of tyres.
Now to the hypothetical conspiracy.
Problem is, that as each tyre is barcoded it is readily identifiable and thus if it is of different construction, known faulty or what not, it is as identifiable by means of the barcode.
Where is the conspiracy?
Well, if someone wanted to influence the outcome and if tyres were produced unequally, the barcode allows the provision of tyres to an identified rider (for positive or negative results)
Not saying that this is happening at all, but will say (and have worked at races where 'random' tyre allocation is in place and have seen what happens), that all systems can be subverted if people want to subvert them, be that deliberately, accidentally or corruptly.
This all said, IMO only here but MotoGP is not a club event, nor a national level series and thus the ability to do that I have outlined above is greatly reduced as the people doing the allocations will be extremely closely scrutinised by teams, officials, riders and media such that any sniff of corruption would creep to the surface