Same sort of issues that have existed in racing since the very beginning and are not unique to last year's Michelins. Bridgestone had failures even when they weren't a new supplier and the issue with the Michelins wets were that they were used in the wrong conditions. The soft wets that experienced problems at Brno were fine in the soaked conditions at Assen. We debated this for at least a week last year and even motomatters had an article that said essentially the same thing I was telling all of you.
Tire choices that were unusable on a certain bike? I'm assuming you're talking about the problems the M1 had in cool temps, but that would be more the fault of Yamaha because they control how much weight their bike puts on either tire. It's not Michelin's job to make a tire specifically for the Yamaha, it's Yamaha's job to adjust their bike to the tires. But Yamaha wouldn't have expected any or many races with such unusually cool conditions.
I asked this question before regarding front end washouts, does anyone know for a fact that there were more front end crashes last year than 2015? It's easy to think there was because you remember what's most recent.
You have hit on a major problem with the control tyre, something I have consistently argued against on here since 2008 when the control tyre was first mooted. Imo it is completely ridiculous that something supposedly introduced as a cost saving measure and to make the contest more even requires massive expenditure by manufacturers to re-tool their bikes to suit the tyres rather than a range of tyres being available to suit the bikes.
Any manufacturer of course can be caught unawares by conditions at a particular time and at a particular track which has certainly happened to both Michelin and Bridgestone. I don't see how tyres which explode systemically or fail in a variable fashion by sudden delamination can be considered acceptable; I would have no problem with those Michelin wets simply wearing out when conditions became less favourable for their use.